rs4212852 SNP Detail

Summary

• ID
  rs4212852
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:85849394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGGACTCT TACTTTGTTC
  ATCTGAAGAT TAGTGTGGGC AGTATGATGC TCAGGATTTC ACAGTAAGGG AGAGCCAAAA
  ATAATGCTCT ATTTGTATTA TTGCAGGAAT CTTTTATGGA GTCTGGTCCT CGACTAGAAG
  GAATATAACA GAGCCTGGAT GGAGAGAGTT AGGTGTATGA AGTAGAAACT CTTGATAGCA
  K
  GATTAGGCCT ATTAATTCAT TCTGATTGAA AAATCAGTTA TAATTAACAG CCTCTATATT
  GTATCACATA TATTTCAATT AAAGGCATAA CACAAAAGCC AGCTTTTCCC TCCCCTTTTA
  TGCTATAACC AATATGAAAT GATGCTAAGT AGGCAGCTGG TAACCTCAGT AGACTTCTGC
  ATTTTGTAAG CAATTCTTGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss6375509	mCV24929986_83280248	CRAMUS	CRAMUS_MOUSE	f	SNP	T	G	G
ss39466415	mCV24929986	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss148470968	ENSMUSSNP4898221	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs4212852					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:85849394 () rs orientation: forward

Symbol	Name	Function Class
1700007H22Rik	RIKEN cDNA 1700007H22 gene	617 bp downstream