rs4214388 SNP Detail

Summary

• ID
  rs4214388
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:87281877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCGT GGTTTGAAGA TCTTGAGCCA
  Y
  AGTGGCTATG GATTCCAGAA GATTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss6377063	mCV22369288_84679558	CRAMUS	CRAMUS_MOUSE	f	SNP	T	C	C
ss39435900	mCV22369288	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss148490382	ENSMUSSNP1266322	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs4214388					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:87281877 () rs orientation: forward

Symbol	Name	Function Class
Cct8	chaperonin containing TCP1 subunit 8	within coordinates
Usp16	ubiquitin specific peptidase 16	1474 bp downstream