rs4215715 SNP Detail

Summary

• ID
  rs4215715
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:88626579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTG ACCTTTCAAC TCTACTACAA
  K
  AGAGAGCTAG CATTGCAACT ATTAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss6378419	mCV24727344_86032933	CRAMUS	CRAMUS_MOUSE	f	SNP	T	T					T	G
ss39454145	mCV24727344	ABI	CRAMUS_MOUSE	f	SNP	T	T					T	G
ss48328206	NES12190182	PERLEGEN	MM_PANEL2	f	SNP		T	G	T	T	T		G	T	T		T	T		G
ss148507914	ENSMUSSNP2331542	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T						G
ss325271687	CHEV_16_88829936	CHEVERUD	SCREENING_POP	f	SNP											G			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs4215715					SNP	T	T	G	T	T	T	T	G	T	T	G	T	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48328206	NES12190182	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:88626579 () rs orientation: forward

Symbol	Name	Function Class
Krtap15-1	keratin associated protein 15-1	within coordinates
Tssr139247	transcription start site region 139247	691 bp downstream
Tssr139248	transcription start site region 139248	556 bp downstream