rs4215717 SNP Detail

Summary

• ID
  rs4215717
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:88626725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTATT TTAAATAAAC TTATGTCTGT
  R
  GCATCAATTT TGGCATTCTA GTGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6378421	mCV24727616_86033079	CRAMUS	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss39485109	mCV24727616	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss148507925	ENSMUSSNP2085	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
ss325271689	CHEV_16_88830082	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4215717					SNP	G	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:88626725 () rs orientation: forward

Symbol	Name	Function Class
Krtap15-1	keratin associated protein 15-1	within coordinates
Tssr139247	transcription start site region 139247	837 bp downstream
Tssr139248	transcription start site region 139248	702 bp downstream