rs4216046 SNP Detail

Summary

• ID
  rs4216046
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr16:88828775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATGGCTATG GAGGCCTGGG CTGTGGTTAT GGCTCCTACT
  ATGGCTGTGG CTACCGTGGA CTGGGCTGTG GCTATGGCTA TGGCTGTGGC TATGGCTCAC
  R
  CTCTCTCTAT GGCTGTGGCT ATGGATGCGG CTCTGGCTAT GGCTCTGGAT TTGGCTACTA
  CTATTGAAGA CACCACGGTT CTTCCTCTAC TGTTTTGTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss6378754	mCV22991096_86237070	CRAMUS	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss39425743	mCV22991096	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss148510980	ENSMUSSNP2289210	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs4216046					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:88828775 () rs orientation: forward

Symbol	Name	Function Class
Krtap6-1	keratin associated protein 6-1	Coding-NonSynonymous