rs4216268 SNP Detail

Summary

• ID
  rs4216268
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:89040415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTTCATC TAAGAAGCAA
  TGTGAATTCA AGATAAGCTG TCACAACCCT GTGTGTTTGC AAACATGATA CATGCTATTT
  TTTTCATAGC TACATCAAGT TAAATTTCCA TCAACAATTC AGAAGGGTGC CTTCTTCTAT
  TGATCTTTCT TCTCTCCAGT ATTAACTCTC TAAGAGTTTT GGGCTGAAAT ATCATCTTGT
  W
  TTTTAATTGC ATCTCAGAGA TATTAGTGAA GTAGAACATT ACTCTGTTCA TTTGTCCACC
  TGTAACTTTG CCTTTGAAAA ACACCTGTTC AAAATCTCAG CTTATTTGTC CATCCACTTA
  TATGCTTTTA CTTGGTTAGC TTAGCTATGT ACAACACTCC CAACCCATAT TTTTGCATTA
  ATACCTCTCA TGATATAGTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	MSM/Ms
ss6378976	mCV22616116_86443225	CRAMUS	CRAMUS_MOUSE	f	SNP	A	T	T
ss39480270	mCV22616116	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss148514011	ENSMUSSNP6886584	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	MSM/Ms
rs4216268					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:89040415 () rs orientation: forward

Symbol	Name	Function Class
Gm35004	predicted gene, 35004	719 bp downstream