rs4218812 SNP Detail

Summary

• ID
  rs4218812
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:90864515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAAT GGCTCAGACT TTAAACCAGA
  Y
  AGCCGAGCAC ACCGTAAGGA GCCCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss6381539	mCV23756503_89149289	CRAMUS	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss39483722	mCV23756503	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss148549740	ENSMUSSNP5108694	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs4218812					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:90864515 () rs orientation: forward

Symbol	Name	Function Class
Epcip	exosomal polycystin 1 interacting protein	within coordinates
Gm60345	predicted gene, 60345	within coordinates
Rr519269	regulatory region 519269	1256 bp proximal
Rr519270	regulatory region 519270	1508 bp proximal
Tssr142072	transcription start site region 142072	1468 bp downstream
Tssr142073	transcription start site region 142073	1499 bp downstream
Tssr142074	transcription start site region 142074	1515 bp downstream
Tssr142075	transcription start site region 142075	1539 bp downstream