rs4220495 SNP Detail

Summary

• ID
  rs4220495
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:94227123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGAA GTAAGTGTCT GGTAAAGATT
  R
  TTTTATAAAA CTGACAAGAC ATGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss6383285	mCV24839766_92513605	CRAMUS	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss39451300	mCV24839766	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss148579457	ENSMUSSNP2805614	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
ss325281218	CHEV_16_94647871	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4220495					SNP	G	G	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:94227123 () rs orientation: forward

Symbol	Name	Function Class
Tssr139547	transcription start site region 139547	1157 bp downstream
Tssr139548	transcription start site region 139548	67 bp downstream
Ttc3	tetratricopeptide repeat domain 3	within coordinates