ACGAT GGTCAAATAC GACGATGTTT K ATCTCAAATA CGGCGATTTT TTATCTCAAA TACGACGATT TTTTATCTCA AATACGTCGA TTTTTTTATC TCAAATACGG CGTCGAATGG TAGGGTAGAG GAAACCTCCC AAGCTGGCCT CTGGTCTCGA CGTGCGGGTG TTTGCACACA TGCCACACAC AGGTGCTCGC ACCCTTGCCA CACACAAAAG TGTGCATGTT ACAACCGGGG AGCAACGACG CAGGTCTTTA CACTTGTTCC CAGCGGTTTG CAGAGAAGAG CAGGTGCACG GAGTGATCCT CTAGTTCCGT TTTCTTTTCC AAGTAG K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129/Sv |
A/J |
BALB/cByJ |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
SPRET/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss6384871 | AA259483_26 | TWGNF | TWGNF-Mouse | f | SNP | T | T | T | T | T | T | T | G |
SNP Consensus Information | |||||||||||||
SNP | Consensus Type | 129/Sv |
A/J |
BALB/cByJ |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
SPRET/EiJ |
||||
rs4221920 | SNP | T | T | T | T | T | T | T | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss6384871 | AA259483_26 | TWGNF | TWGNF-Mouse-2 | f | SNP | G/T |
Location: Chr1:93728292 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi608 | CpG island 608 | 1035 bp proximal | ||||||
Dtymk | deoxythymidylate kinase | within coordinates | ||||||
Gm70929 | predicted gene, 70929 | 1418 bp upstream | ||||||
Rr29859 | regulatory region 29859 | 108 bp proximal | ||||||
Rr366972 | regulatory region 366972 | 1211 bp upstream | ||||||
Tssr8200 | transcription start site region 8200 | 1581 bp upstream | ||||||
Tssr13051 | transcription start site region 13051 | 1200 bp upstream | ||||||
Tssr13052 | transcription start site region 13052 | 1270 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 12/17/2024 MGI 6.24 |
![]() |
|