rs4224957 SNP Detail

Summary

• ID
  rs4224957
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150227670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCCCTAC AGATGGGCCT
  CGGTCCCTAC AGCTTCATTA TCTTTGCAAC CATCTGTTTC CTCACCACCA TCTACATCTT
  CATGGTCGTC CCAGAGACCA AGGGCAGGAC ATTCATTGAG ATCAACCAGA TTTTTACCAT
  GAAGAACAAG GTGTCAGACG TATATCCGAA GAAGGAGGAG GAGCTTGGCG CCCTCCCACA
  Y
  GCCATCTTGG AGCAGTAGCA GAGCCAGGCC ACCAGCCAGC CTGGCCAGTC TGCATGGACC
  TCCTGTCTAG ACGTTGGTTC TGGATTCTTG TCTGTGACAC TGGAAGGGAG ATGAGCCTGG
  TGGGAAGTGT CAGCCCCGTC ACCGGCCTCC ACTCAGTGGG AACATCTGCC TGCTTTTGTG
  CTTTCCTGCT GTCTCTAACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss6387943	AI526984_29	TWGNF	TWGNF-Mouse	f	SNP	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs4224957					SNP	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6387943	AI526984_29	TWGNF	TWGNF-Mouse-2	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150227670 () rs orientation: forward

Symbol	Name	Function Class
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	within coordinates
Tssr40376	transcription start site region 40376	925 bp downstream