rs4224958 SNP Detail

Summary

• ID
  rs4224958
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  111
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150227804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                     AA AAAAAAGAGC TTGGCGCCCT CCCACACGCC ATCTTGGAGC
  AGTAGCAGAG CCAGGCCACC AGCCAGCCTG GCCAGTCTGC ATGGACCTCC TGTCTAGACG
  TTGGTTCTGG ATTCTTGTCT GTGACACTGG AAGGGAGATG AGCCTGGTGG GAAGTGTCAG
  M
  CCCGTCACCG GCCTCCACTC AGTGGGAACA TCTGCCTGCT TTTGTGCTTT CCTGCTGTCT
  CTAACTATAG AGGCCAGTCA TAGGCTCTTG GTCTCGTGCA AAGCCATCCC TTGCCTTTAC
  CGGGTTGACT CTGGTGAGGG TCTTGTAACA TCGCTTTTCT AACAAAAAGA GTTGCTGCAA
  GACCAGATGT GATGATCATA TTTTACCAGC AAAACTGACT CTTGTGTGTT TCCCGTGGGC
  CTGGAGAGAA CTCTGGCATC TACTTGGGAT TGATGTTGTC TTCTTTCCCT ACCCAGCCAT
  GTCATAAAG                                                        
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss6387944	AI526984_163	TWGNF	TWGNF-Mouse	f	SNP	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs4224958					SNP	C	C	C	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6387944	AI526984_163	TWGNF	TWGNF-Mouse-2	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150227804 () rs orientation: forward

Symbol	Name	Function Class
Rr605199	regulatory region 605199	866 bp proximal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	within coordinates
Tssr40376	transcription start site region 40376	1059 bp downstream