rs4226017 SNP Detail

Summary

• ID
  rs4226017
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:81935148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATAATTC TTATCCTGGT
  GAAGGTAAAA GCTCTGACTC AAGCCGAATC CCTCAGAGAA GAGCGTCCCC TGGAGCCCCT
  CCCAGCCCAG AGTACAGGTG TTTGAGTGCG CCGTGTGGGA GTGCCCAGAG TCAAGATGAC
  CGTGTCACAG CCGATGCCGC CTTTGCTGGG TGCCCACTTG GGGTGTGGCC AGGCCTCCTG
  R
  TGCTTCGTAG CTGAGGGAAG TAATGCACAG CAGCAGCCGA GCTCAGTGTG CTGCTCTTTT
  ACTCTCTCAA TCCGGAAGGA AATGAAGCAA TCTGACACAC AGAAGCATGC CTGAATCAAA
  ACCATCTTCA GCAAACTCCA ATGTTTGCAG ATCAGCTAAT GAGGAAGCTC TATCTCTGGA
  TGGTTTCTTT TATCTTATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J
ss6389009	AW146020_149	TWGNF	TWGNF-Mouse	f	SNP	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J
rs4226017					SNP	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6389009	AW146020_149	TWGNF	TWGNF-Mouse-2	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:81935148 () rs orientation: forward

Symbol	Name	Function Class
Gcfc2	GC-rich sequence DNA binding factor 2	within coordinates
Mrpl19	mitochondrial ribosomal protein L19	within coordinates
Rr632566	regulatory region 632566	1561 bp distal