rs4226018 SNP Detail

Summary

• ID
  rs4226018
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:81935153 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTCTTATC CTGGTGAAGG
  TAAAAGCTCT GACTCAAGCC GAATCCCTCA GAGAAGAGCG TCCCCTGGAG CCCCTCCCAG
  CCCAGAGTAC AGGTGTTTGA GTGCGCCGTG TGGGAGTGCC CAGAGTCAAG ATGACCGTGT
  CACAGCCGAT GCCGCCTTTG CTGGGTGCCC ACTTGGGGTG TGGCCAGGCC TCCTGATGCT
  K
  CGTAGCTGAG GGAAGTAATG CACAGCAGCA GCCGAGCTCA GTGTGCTGCT CTTTTACTCT
  CTCAATCCGG AAGGAAATGA AGCAATCTGA CACACAGAAG CATGCCTGAA TCAAAACCAT
  CTTCAGCAAA CTCCAATGTT TGCAGATCAG CTAATGAGGA AGCTCTATCT CTGGATGGTT
  TCTTTTATCT TATTCTTTGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J
ss6389010	AW146020_154	TWGNF	TWGNF-Mouse	f	SNP	T	T	T	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J
rs4226018					SNP	T	T	T	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6389010	AW146020_154	TWGNF	TWGNF-Mouse-2	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:81935153 () rs orientation: forward

Symbol	Name	Function Class
Gcfc2	GC-rich sequence DNA binding factor 2	within coordinates
Mrpl19	mitochondrial ribosomal protein L19	within coordinates
Rr632566	regulatory region 632566	1566 bp distal