rs4226019 SNP Detail

Summary

• ID
  rs4226019
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:81935157 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTATCCTGG TGAAGGTAAA
  AGCTCTGACT CAAGCCGAAT CCCTCAGAGA AGAGCGTCCC CTGGAGCCCC TCCCAGCCCA
  GAGTACAGGT GTTTGAGTGC GCCGTGTGGG AGTGCCCAGA GTCAAGATGA CCGTGTCACA
  GCCGATGCCG CCTTTGCTGG GTGCCCACTT GGGGTGTGGC CAGGCCTCCT GATGCTTCGT
  R
  GCTGAGGGAA GTAATGCACA GCAGCAGCCG AGCTCAGTGT GCTGCTCTTT TACTCTCTCA
  ATCCGGAAGG AAATGAAGCA ATCTGACACA CAGAAGCATG CCTGAATCAA AACCATCTTC
  AGCAAACTCC AATGTTTGCA GATCAGCTAA TGAGGAAGCT CTATCTCTGG ATGGTTTCTT
  TTATCTTATT CTTTGGTGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J
ss6389011	AW146020_158	TWGNF	TWGNF-Mouse	f	SNP	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J
rs4226019					SNP	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6389011	AW146020_158	TWGNF	TWGNF-Mouse-2	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:81935157 () rs orientation: forward

Symbol	Name	Function Class
Gcfc2	GC-rich sequence DNA binding factor 2	within coordinates
Mrpl19	mitochondrial ribosomal protein L19	within coordinates
Rr632566	regulatory region 632566	1570 bp distal