rs4226406 SNP Detail

Summary

• ID
  rs4226406
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  111
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16405336 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              TATGTTTTGC TGTAGATGTA
  Y
  GGTTTGGGAC AGTTTTCATC TGTATATTTT TTTGATGCTC AGATGTAAAA ATCCATGGAC
  ATAAAGGCCC CATGTATTGA GTTTCTTGTC CTGAGTCTGG CATTTTTTCC CGTGCGACCT
  TGCACAAGAT CCTGTTTCGT CTGAACAATT TCCAGTGTGC TGAAAAGCAC ACATAAGATT
  TTAGCCATTT GACAACCACA GCTGAATGGC ATGAAGCTCA ATCATACTGT TGTGTGACCG
  TCACCATGGT CCATTCCTAA GCCCGATTTA AACCTTTCCA TTCACAACAG CAACTAACAT
  TCTGCCTCTT TCCCTATACA TGGAACAAAA CCAATTGTTT TGTTTATGGT TACTATCAGC
  ACAGA                                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss6389399	AA407838_21	TWGNF	TWGNF-Mouse	f	SNP	T	T	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs4226406					SNP	T	T	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6389399	AA407838_21	TWGNF	TWGNF-Mouse-2	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16405336 () rs orientation: reverse

Symbol	Name	Function Class
Ceacam15	CEA cell adhesion molecule 15	within coordinates