rs4226407 SNP Detail

Summary

• ID
  rs4226407
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  111
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16405335 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                            T ATGTTTTGCT GTAGATGTAT
  R
  GTTTGGGACA GTTTTCATCT GTATATTTTT TTGATGCTCA GATGTAAAAA TCCATGGACA
  TAAAGGCCCC ATGTATTGAG TTTCTTGTCC TGAGTCTGGC ATTTTTTCCC GTGCGACCTT
  GCACAAGATC CTGTTTCGTC TGAACAATTT CCAGTGTGCT GAAAAGCACA CATAAGATTT
  TAGCCATTTG ACAACCACAG CTGAATGGCA TGAAGCTCAA TCATACTGTT GTGTGACCGT
  CACCATGGTC CATTCCTAAG CCCGATTTAA ACCTTTCCAT TCACAACAGC AACTAACATT
  CTGCCTCTTT CCCTATACAT GGAACAAAAC CAATTGTTTT GTTTATGGTT ACTATCAGCA
  CAGA                                                             
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss6389400	AA407838_22	TWGNF	TWGNF-Mouse	f	SNP	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs4226407					SNP	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6389400	AA407838_22	TWGNF	TWGNF-Mouse-2	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16405335 () rs orientation: reverse

Symbol	Name	Function Class
Ceacam15	CEA cell adhesion molecule 15	within coordinates