rs4226424 SNP Detail

Summary

• ID
  rs4226424
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16405026 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CAACA GCAACTAACA TTCTGCCTCT
  K
  TCCCTATACA TGGAACAAAA CCAAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SPRET/EiJ	WSB/EiJ
ss6389417	AA407838_331	TWGNF	TWGNF-Mouse	f	SNP	G			T	T		G	T	G	T							G
ss51469875	NES13978636	PERLEGEN	MM_PANEL2	r	SNP		C		A	A	C				A	A	A		A	A	C		A
ss148392622	ENSMUSSNP2774990	ENSEMBL	ENSEMBL_Sanger	r	SNP			C	A						A			C
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SPRET/EiJ	WSB/EiJ
rs4226424					SNP	G	G	G	T	T	G	G	T	G	T	T	T	G	T	T	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6389417	AA407838_331	TWGNF	TWGNF-Mouse-2	f	SNP	G/T
ss51469875	NES13978636	PERLEGEN	MM_PANEL	r	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16405026 () rs orientation: reverse

Symbol	Name	Function Class
Ceacam15	CEA cell adhesion molecule 15	230 bp downstream