rs4227963 SNP Detail

Summary

• ID
  rs4227963
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115061595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGGGCAGC CGAGGCCCGT
  GGGCACACCT CTCACCTGCC AAGGCTGCCG TGGGTAACCT TGAGCTCCGT TTTATTCACG
  AGAGTTGGTG TTCTTTATTT CTCACGTTGC CACAGTCATT CTGCCATGGT CTGTCCTACT
  CACCGTCTCC TGTCTTTTGT CACGATGCAG GCTGAGGTGG CACAGCCTGG AAAAGGAGCG
  M
  ATTCCTGGCG GAGGAGGGGA GTGGCCACCG GCAGAGGGGG TAGTGGCCAC CCGGCGGAGG
  GGAGAGTGGC CACCCTGGGG TGATGCTTGT TCTGATCCAA GGCTGTCTGT CCACATCCTA
  GAAAGAGCAA GCAGGCCTTC CAGTTGCACA AGGTGACAGG AAGCCACTGG GGGCTGATAT
  GGAACCTTCT AGAAGGGAGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss6390968	AI450237_83	TWGNF	TWGNF-Mouse	f	SNP	A	A	A	A	A	C	A	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs4227963					SNP	A	A	A	A	A	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6390968	AI450237_83	TWGNF	TWGNF-Mouse-2	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115061595 () rs orientation: forward

Symbol	Name	Function Class
2210411A11Rik	RIKEN cDNA 2210411A11 gene	349 bp upstream
Osbpl10	oxysterol binding protein-like 10	302 bp downstream