rs4230695 SNP Detail

Summary

• ID
  rs4230695
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  111
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34141701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

           T TGGATCTTAT GCACGACCTT AGACCATTTG AATCTGTTTT ATGCTTAAAT
  CAAAGTGCTT TGATCAAATG TATAATCTGC CATATCTTTA CATATTTGTT GTAGCAGTTT
  GTATTAAAAG AATCACAAGT GCAAATTAAA AGGTCATTTA TCATTTATTT AACTAAACTG
  TCTTGGTTTA GTTTACAGTT CTTTAAAAGT TCTAAATTAA AACATTAAAA AATGCAATTG
  ACAGACACTT GTATGACTTA CAAAGTTATT TTTGATAGTC TTAACATTAC TTGAATTATT
  CAAAATAACA GTATATTTTA AATTAAGAAA GGTAAATATA TTATTTGTTT GATACATTAA
  GACTGAGACT AACAATGCTC TTGTTTATGA TTTGAAAAGT TTTCAGGCAA ATCCAACTTA
  R
  TGTTT                                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss6393719	AA409043_412	TWGNF	TWGNF-Mouse	f	SNP	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs4230695					SNP	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6393719	AA409043_412	TWGNF	TWGNF-Mouse-2	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34141701 () rs orientation: forward

Symbol	Name	Function Class
Mtdh	metadherin	within coordinates
Tssr131025	transcription start site region 131025	388 bp downstream
Tssr131026	transcription start site region 131026	967 bp upstream
Tssr131027	transcription start site region 131027	1405 bp upstream
Tssr131028	transcription start site region 131028	1506 bp upstream