rs4231509 SNP Detail

Summary

• ID
  rs4231509
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46458920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACTGGTG CCTGGAACCA
  AATGTAATCC TCTGAAGCCA TGGCTGGGAC GGAAGGTCTG CCACATGACA GTGTCACGGT
  GAGTTTGTGG CCCCGGCTGG GCACCCGGTA GTTCAGTTTC GGTTGAAACC AATCTTCTCC
  ACAGTCACGG TGGCCCTGAA CCATGACAAT GGTACCCATG AGCGGGGGAG TCTGCAGTTC
  R
  CTAAATGGAT CCGCCAAGAA GATGGCTCTG AAGAGACGAC GCAAGCAAGC CGCTGTGTTC
  AGGCCCTGGT CCACACCGAA TGGAGCCAGC CTGGACAGGT CAAGTTCATA GAATTCTTTA
  GGGCTGAGGG CATTGCCTCC AAGAAGGATC AACACTTGTG GTACGAGTGT CCGGGCAAAG
  AAGTCTCGTA GGTGACTGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	SPRET/EiJ
ss6394556	C76045_297	TWGNF	TWGNF-Mouse	f	SNP	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	SPRET/EiJ
rs4231509					SNP	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6394556	C76045_297	TWGNF	TWGNF-Mouse-2	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46458920 () rs orientation: forward

Symbol	Name	Function Class
Mad2l1bp	MAD2L1 binding protein	within coordinates
Rr341808	regulatory region 341808	1520 bp distal
Rr341809	regulatory region 341809	within coordinates