rs4232016 SNP Detail

Summary

• ID
  rs4232016
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  111
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5901665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                   ACAGC AGTCAAGATG
  ACCTAAAGGT TGCCAAGAGT GGGCTGGTAG CTCAGGGAAC ACACAAGGCT CCTAAAGGGT
  TAACTACAGT GGCAGGTGAC ATCATCTTAC AGACAATGCC TTATAGTGAG GTCAGCCTTT
  TCTTTCTCTC TGCTGCCAAA ACTTCTGGAG CTCACTGGCA GGCAAACTGG TTTCATTTTC
  R
  GAGATGATGG TTTCCATTTC TGTGGCTTTC CACCAAGAAG ACAAAGCTAA GCTATGTCTC
  TGGGATCCAG TGGGGATTCC CAGGGAGTAC AAAGGGCTTA AGGGCCAGGA CAGCTCCACT
  CCCAGAACTA GCTCTTCCCA GGAGCAGTCA AGGCTGCCAG GGGTGCAGAG CTGGGGACAG
  ATAGGCCTTT GCGATGTCCT TCGGAGAGAG GTGGCTTGAG CCGCTGTGGC TGGCCTCAGG
  GAATCCCACA GTGCAGTGCA ATTCGGAGTT GCCACGCCCC AGGCT                
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	SPRET/EiJ
ss6395064	AU018809_196	TWGNF	TWGNF-Mouse	f	SNP	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	SPRET/EiJ
rs4232016					SNP	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6395064	AU018809_196	TWGNF	TWGNF-Mouse-2	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5901665 () rs orientation: forward

Symbol	Name	Function Class
Frmd8	FERM domain containing 8	within coordinates
Frmd8os	FERM domain containing 8, opposite strand	265 bp downstream
Rr370436	regulatory region 370436	576 bp downstream
Tssr157784	transcription start site region 157784	1676 bp upstream
Tssr157785	transcription start site region 157785	1623 bp upstream