rs4232017 SNP Detail

Summary

• ID
  rs4232017
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  111
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5901676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                       ACAGCA GTCAAGATGA CCTAAAGGTT
  GCCAAGAGTG GGCTGGTAGC TCAGGGAACA CACAAGGCTC CTAAAGGGTT AACTACAGTG
  GCAGGTGACA TCATCTTACA GACAATGCCT TATAGTGAGG TCAGCCTTTT CTTTCTCTCT
  GCTGCCAAAA CTTCTGGAGC TCACTGGCAG GCAAACTGGT TTCATTTTCA GAGATGATGG
  K
  TTCCATTTCT GTGGCTTTCC ACCAAGAAGA CAAAGCTAAG CTATGTCTCT GGGATCCAGT
  GGGGATTCCC AGGGAGTACA AAGGGCTTAA GGGCCAGGAC AGCTCCACTC CCAGAACTAG
  CTCTTCCCAG GAGCAGTCAA GGCTGCCAGG GGTGCAGAGC TGGGGACAGA TAGGCCTTTG
  CGATGTCCTT CGGAGAGAGG TGGCTTGAGC CGCTGTGGCT GGCCTCAGGG AATCCCACAG
  TGCAGTGCAA TTCGGAGTTG CCACGCCCCA GGCT                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	SPRET/EiJ
ss6395065	AU018809_207	TWGNF	TWGNF-Mouse	f	SNP	T	T	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	SPRET/EiJ
rs4232017					SNP	T	T	T	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6395065	AU018809_207	TWGNF	TWGNF-Mouse-2	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5901676 () rs orientation: forward

Symbol	Name	Function Class
Frmd8	FERM domain containing 8	within coordinates
Frmd8os	FERM domain containing 8, opposite strand	276 bp downstream
Rr370436	regulatory region 370436	587 bp downstream
Tssr157784	transcription start site region 157784	1687 bp upstream
Tssr157785	transcription start site region 157785	1634 bp upstream