rs4232018 SNP Detail

Summary

• ID
  rs4232018
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5901861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCAGAGAT GATGGTTTCC
  ATTTCTGTGG CTTTCCACCA AGAAGACAAA GCTAAGCTAT GTCTCTGGGA TCCAGTGGGG
  ATTCCCAGGG AGTACAAAGG GCTTAAGGGC CAGGACAGCT CCACTCCCAG AACTAGCTCT
  TCCCAGGAGC AGTCAAGGCT GCCAGGGGTG CAGAGCTGGG GACAGATAGG CCTTTGCGAT
  R
  TCCTTCGGAG AGAGGTGGCT TGAGCCGCTG TGGCTGGCCT CAGGGAATCC CACAGTGCAG
  TGCAATTCGG AGTTGCCACG CCCCAGGCTT TATCAGCTCA GAGCACAGGA GACAAGGCAA
  AATCTAACCC TTAAACCCAG ATCACAGGAA AACAAAGGAA CTGGTTGGTA TGGGACAGCC
  AATCCAGCCC AGGGACATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	SPRET/EiJ
ss6395066	AU018809_392	TWGNF	TWGNF-Mouse	f	SNP	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	SPRET/EiJ
rs4232018					SNP	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6395066	AU018809_392	TWGNF	TWGNF-Mouse-2	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5901861 () rs orientation: forward

Symbol	Name	Function Class
Frmd8	FERM domain containing 8	within coordinates
Frmd8os	FERM domain containing 8, opposite strand	461 bp downstream
Rr370436	regulatory region 370436	772 bp downstream
Tssr157784	transcription start site region 157784	1872 bp upstream
Tssr157785	transcription start site region 157785	1819 bp upstream