rs4232463 SNP Detail

Summary

• ID
  rs4232463
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  111
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:9303301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                   TTTGGGGATT ACAGTTTCTA AAATTTATAT
  TTTAGGAAGA TGGTGATGCT GGTACTAGTG GTGATGAAAA TGCTGCAATT AAAAAAAAAA
  M
  ACAAGTTATT GTCTATGCAC ATAAGATCTA TTTGTATAGG TATTTAAGCC AAAGAAGAAA
  TGGATTCTAA GCAGGATATG TATTATCATG TATACATTTC TTAGAATTCA GTTCAAAGTT
  TGGCTGGAGC AGATCATTTC TGTCAGTAAA TAAATGTGTT CTTCTTTTTC AGCTTACAGA
  CTGGAACTAG AAGTGTTAGC CACCATCATC ATAGGAGAAT AGGTCTCTGA ATTC      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss6395537	C88302_91	TWGNF	TWGNF-Mouse	f	SNP	A	A	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs4232463					SNP	A	A	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6395537	C88302_91	TWGNF	TWGNF-Mouse-2	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:9303301 () rs orientation: forward

Symbol	Name	Function Class
Cybb	cytochrome b-245, beta polypeptide	within coordinates
Tssr160517	transcription start site region 160517	1563 bp downstream
Tssr160518	transcription start site region 160518	1061 bp downstream
Tssr160519	transcription start site region 160519	417 bp downstream
Tssr160520	transcription start site region 160520	353 bp downstream
Tssr160521	transcription start site region 160521	299 bp downstream
Tssr160522	transcription start site region 160522	182 bp downstream
Tssr162873	transcription start site region 162873	1414 bp upstream
Tssr162874	transcription start site region 162874	1158 bp upstream
Tssr162875	transcription start site region 162875	1135 bp upstream
Tssr162876	transcription start site region 162876	979 bp upstream
Tssr162877	transcription start site region 162877	960 bp upstream
Tssr162878	transcription start site region 162878	908 bp upstream
Tssr162879	transcription start site region 162879	802 bp upstream
Tssr162880	transcription start site region 162880	716 bp upstream
Tssr162881	transcription start site region 162881	698 bp upstream
Tssr162882	transcription start site region 162882	398 bp upstream
Tssr162883	transcription start site region 162883	8 bp upstream
Tssr162884	transcription start site region 162884	21 bp downstream
Tssr162885	transcription start site region 162885	65 bp downstream
Tssr162886	transcription start site region 162886	112 bp downstream
Tssr162887	transcription start site region 162887	139 bp downstream
Tssr162888	transcription start site region 162888	192 bp downstream
Tssr162889	transcription start site region 162889	222 bp downstream
Tssr162890	transcription start site region 162890	282 bp downstream
Tssr162891	transcription start site region 162891	316 bp downstream
Tssr162892	transcription start site region 162892	369 bp downstream
Tssr162893	transcription start site region 162893	473 bp downstream
Tssr162894	transcription start site region 162894	503 bp downstream
Tssr162895	transcription start site region 162895	563 bp downstream
Tssr162896	transcription start site region 162896	589 bp downstream
Tssr162897	transcription start site region 162897	616 bp downstream
Tssr162898	transcription start site region 162898	640 bp downstream
Tssr162899	transcription start site region 162899	786 bp downstream
Tssr162900	transcription start site region 162900	796 bp downstream
Tssr162901	transcription start site region 162901	827 bp downstream
Tssr162902	transcription start site region 162902	909 bp downstream
Tssr162903	transcription start site region 162903	970 bp downstream
Tssr162904	transcription start site region 162904	1071 bp downstream
Tssr162905	transcription start site region 162905	1155 bp downstream
Tssr162906	transcription start site region 162906	1159 bp downstream
Tssr162907	transcription start site region 162907	1232 bp downstream
Tssr162908	transcription start site region 162908	1256 bp downstream