rs4232484 SNP Detail

Summary

• ID
  rs4232484
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:21354753 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              ATGAAATCAG GGTTTTCCAA
  GGAAGGGGTA TGAGAGGATT CTTCAACCTA AAACGCCTGG AATCTGACAG AAATGTTAAG
  TTCCCAGAAC TTTGAATCTA CCTCATAGGT CAGCATCAAT CCAGGAAGGT CTTAGGTGAC
  CTGGTATAAT ATGGGACAGG CAGAGAATGA CATCTTTAAC TTCTGAATTA ATATTTATTG
  W
  GAAGTTTGAG TAAACTTTAG GTAACACAGC TTCAGGTATT ATATTCCTCT AATGTAAGAG
  ATGTACTCGT GTTAAGAATG AGTTCTGTGG ACCTGGGCTT GCTTTAAATC ACCTTCACAG
  ACTCTTATAC ATTCTGGAAC TGTGCCCAGA AATGCAGATT CAAACTACTC CCCAGGGAGT
  CTTTGTTCTG ACAAGTTCCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss6395558	AW107640_127	TWGNF	TWGNF-Mouse	f	SNP	A	A	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs4232484					SNP	A	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6395558	AW107640_127	TWGNF	TWGNF-Mouse-2	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:21354753 () rs orientation: reverse

Symbol	Name	Function Class
Agtr2	angiotensin II receptor, type 2	within coordinates
Rr9669	regulatory region 9669	1153 bp distal
Tssr160708	transcription start site region 160708	1179 bp downstream