rs45632989 SNP Detail

Summary

• ID
  rs45632989
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:85850518 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCTTGAT GAACAGAGAC
  TTCTAGCTGT GTTCTCAGAG AAAAAAAGGA CTGGGTCTCT TTAGGCCTCT TTAACAAAGA
  CATTATATCA GTATGGTTCC TGTTAGAATA AAACACAAGA AGCCAGGTGT TTTGCAACAA
  TAACGACAAT GAAATTAACA ATAACAACAA CAACAACAAA AGGCCAATTT AGTTTTGTAC
  K
  TGGTCTATTG CCACTGAAGG GATTGTGGCA AATGGAAAGA ACTCTAAGAA GCAATGCATA
  AGAGAATACA CAGCAAACTG TAATGTCCAG GCATGTTAGA TGCTAGGTTT GTCCTTATTT
  GCAGCTATCC ATCCTTGAGG TAATAGGTTA TCTGTATAAG TTTTATGCAT TTAGGGCACA
  GTCAACTTCT TTATTCTTAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss60244870	NES15748708	PERLEGEN	MM_PANEL2	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs45632989					SNP	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60244870	NES15748708	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:85850518 () rs orientation: forward

Symbol	Name	Function Class
1700007H22Rik	RIKEN cDNA 1700007H22 gene	within coordinates