rs45637445 SNP Detail

Summary

• ID
  rs45637445
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:80143088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGCTCCAGA TGCACCTTGA ACTAAGCCCT CCCTACCCCT
  CAAGCAAGAA CACTCGAGGC CAGGCTGGAG TCCTGGTGGC TGGCCCTGAG TCCCCAAGAC
  T
  TCTAGTAGCA GTCCTGCTCC ACTCTCTGTA GCTCCCTGGA CTCACAGGGG ACCAGGCAGT
  TGTGGATGGT CCAGGCCACA GCAGAAGCCA CAGGAAGCA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148216400	ENSMUSSNP3747074	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs45637445					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:80143088 () rs orientation: forward

Symbol	Name	Function Class
Atf4	activating transcription factor 4	1346 bp downstream
Rps19bp1	ribosomal protein S19 binding protein 1	1727 bp downstream
Rr505934	regulatory region 505934	1023 bp distal
Rr505935	regulatory region 505935	1987 bp proximal
Tssr132205	transcription start site region 132205	1967 bp downstream
Tssr132206	transcription start site region 132206	1752 bp downstream
Tssr132207	transcription start site region 132207	1701 bp downstream
Tssr135434	transcription start site region 135434	1346 bp upstream