rs45642636 SNP Detail

Summary

• ID
  rs45642636
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40549263 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAGAAGGC ATCTATCTTC
  CTTTCTGAGC AACTGGCTCA GTCAGTTGGG AAAGCGGGAG ACAAGGCAGG GGGCGGCTCT
  AGGCCTCCTG CTCCCTCTCA GTGGAAGCTG CTCTCAGCTT CGGAAAATTC CAGAGGGAGG
  GATGCTCTGC AAGGGGTTTG CATCTGATAA TGAAGATGTG AGGTCTAGTG GCCTCTGGCC
  R
  CTGATGCTGT TCTGGGGGGG TGGGGGGGAT AGAAGGGCAG GTGGAAGGAA CATAGAGGTG
  ATGTGGCTTT AAGTACCAAC CGAGAGTGAG CTGCAGAGAC AGAGAGAGGG TGGGGTGAGC
  ACCCCAGTGG AGGAAGAGGA GGAGATAAAA GTGTGGGCTT CATGCTGCAC AACAGTCCGA
  GACACAGAAA TGAAAGGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147068187	ENSMUSSNP2411305	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs45642636					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40549263 () rs orientation: forward

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	within coordinates
Rr430241	regulatory region 430241	858 bp proximal
Tssr93028	transcription start site region 93028	157 bp downstream