rs45651748 SNP Detail

Summary

• ID
  rs45651748
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:185152431 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             GCAGTCAGAC GAGATACTGG AGAGAAACTG ACAATTGCTG AGAAGGAGGC
  K
  GAGGCTAAGC TGGAAAAGGT TTTGGAAGAC ATCCAGCTGA ACCTTTTCAC           
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss146431889	ENSMUSSNP1440115	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss320175605	CHEV_1_187244113	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs45651748					SNP	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185152431 () rs orientation: forward

Symbol	Name	Function Class
Eprs1	glutamyl-prolyl-tRNA synthetase 1	Coding-Synonymous
Rr425383	regulatory region 425383	645 bp proximal
Tssr10610	transcription start site region 10610	1940 bp downstream