rs45652798 SNP Detail

Summary

• ID
  rs45652798
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:41518506 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGATACCAA TATATTTAAC AATCGAAAAC AGCTGAGGAG
  ACTTGGCACT GGAGTCAAGA GGGAGTGTGG GGACCAACTG TACCTCAGAT GAAAATTTGG
  S
  TTAGCCATTT AAGATGGGCT CCTTGGCGAG AGTTTCTGAC TTGGAAGACC ATATTTTACA
  ACTTTGGCCC AGAAAGCTCA GTTTCTATAG GGAACTTATT                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	CAST/EiJ	KK/HlJ	NOD/ShiLtJ
ss52248963	NES15256843	PERLEGEN	MM_PANEL2	f	SNP	C	G	C	C
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	CAST/EiJ	KK/HlJ	NOD/ShiLtJ
rs45652798					SNP	C	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52248963	NES15256843	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:41518506 () rs orientation: forward

Symbol	Name	Function Class
Ccdc162	coiled-coil domain containing 162	within coordinates