rs45659465 SNP Detail

Summary

• ID
  rs45659465
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:174886520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATAGATC CCAAGCTCTA
  TTCTAGCTAA ACTATTCACT AGTTTTGGTC AGGGATAGGC TCCATCAGAA GCCAGAAAAC
  CCTCCTCAAA TAGGTCTGAA AACGTGGGAG TCTGATAGGT GCTGTTTTTC CATAGAAGAC
  AAACTCTCTT CTTGGTCCCA GGTCAGCCCG CCTGGGAGAT GTTTCCACTG TTGTATTCCT
  R
  ACTCTATACC ACCCAAACCT GAGATTAACC CGGGGTGGGG TGGGGGCAGC TTATGCCTCA
  GCTCACAGGC TGTGAACTTT TTCTCTCCCC TTCCTTTTAC AGGTAGCACC AACAACAAAA
  GTTCCAAAGC AACGAGATTC TGCATCTTTT AATGAAAGAT AAAACAACAA TATAAACATA
  CACAAATTTA CAGAGAAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60347204	NES15840991	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs45659465					SNP	G	G	G	G	G	A	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60347204	NES15840991	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:174886520 () rs orientation: forward

Symbol	Name	Function Class
Rgs7	regulator of G protein signaling 7	133 bp downstream