rs45660601 SNP Detail

Summary

• ID
  rs45660601
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:137546550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTAGA AGAATCCATG CATCCCAGAG
  T
  CAGTGAGATA CGCTACCCCC AAAGA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss133873206	ENSMUSSNP5832867	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs45660601					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:137546550 () rs orientation: forward

Symbol	Name	Function Class
Eps8	epidermal growth factor receptor pathway substrate 8	within coordinates
Rr640222	regulatory region 640222	1318 bp distal
Rr640223	regulatory region 640223	within coordinates
Rr640224	regulatory region 640224	671 bp proximal
Rr640225	regulatory region 640225	1455 bp proximal
Rr640226	regulatory region 640226	1773 bp proximal
Tssr63894	transcription start site region 63894	1194 bp downstream
Tssr63895	transcription start site region 63895	1233 bp downstream
Tssr63896	transcription start site region 63896	1260 bp downstream
Tssr63897	transcription start site region 63897	1455 bp downstream
Tssr63898	transcription start site region 63898	1486 bp downstream