rs45664755 SNP Detail

Summary

• ID
  rs45664755
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40505669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAATTACGT CTCTAGAATC
  AAATGACTTT CAGGGAGGTT TAATGTGGGC TTTTCCTACT ACTGAGCTGT GTGTGTTTCT
  GAGGAGGTGA CACTCAGCAA ATACCAGTTC CCTTCTATAA ATATTTGGTT CATCCTAACT
  TATTTTCTGA ATAAATTTTC CATCTGCCAC CAGGCCGGCA TCTCAGCTAT CAACAACTCT
  R
  AACAATGCGG CAGGGGAAAC GAGTGCTTGG TTCTAGCTGG GACTTTTTGG AAGTCAGACA
  GACCACCCAT TTATTTGCCA TGCAAACAAA TCAGCCGGAG AAACTCCAGG CTGGTGGCAA
  GCTGAAGTTC TTGAAAGCCA GACAAAGACA GGTCATAGAG GACGAAACTT CCCCTGCAGG
  CTTGGCAGAG AGGCAGTTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61273397	NES16894421	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs45664755					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61273397	NES16894421	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40505669 () rs orientation: forward

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	338 bp upstream
Rr214674	regulatory region 214674	69 bp distal
Rr224698	regulatory region 224698	within coordinates
Tssr93026	transcription start site region 93026	314 bp upstream
Tssr93027	transcription start site region 93027	384 bp upstream