rs45665569 SNP Detail

Summary

• ID
  rs45665569
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:73813240 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCAGCAGC CAACCATTGG
  ACGAAGCATG TAGTTCCTAA TAGAGGAGTT ATAGAAGGGA TTGAAGGGGT TTATAACCCC
  ATAGGAAGAA CAACAATATC AATCAACTGG ACCCTTCCCC CCACCACATC CTCAGAGCTC
  ACAGGGACTA AGGCATCAAC CAAGGAGTAC ACATGGCTTT AGCTGCATAT GTAGCAGAGG
  W
  TGGCCTTGTC AGGCATCAAT GGGAGGAGAG GTCCTTGGTT TTATGCAGGC TCTAGAGATG
  AGCCTGTGTA GAGGAATCAA GGACAGGAAG GTTGGAGTGG GTGGGTAGTT TGAGGATCAA
  CCTCATAGAA AGAGGGGGAG GGAGGATGGG GTAGGGGCAT TCCAGGAGCC AGGGAACTGG
  GAAAGAGGAT AACATTTGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145180089	ENSMUSSNP545024	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs45665569					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:73813240 () rs orientation: forward

Symbol	Name	Function Class
B930093H17Rik	RIKEN cDNA B930093H17 gene	1345 bp downstream
Large1	LARGE xylosyl- and glucuronyltransferase 1	within coordinates