rs45667166 SNP Detail

Summary

• ID
  rs45667166
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:31898083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGTTCTGGC TAGCTTCAAA TTTGTAATAT AACTGGGATG
  ACCTTGAACT CCTGATCCTT CAGCTTCTAC TTCCCAAGTT CTGGGACAAC AAGAGTGTCC
  Y
  AGATGACCAG AACTAAGAAA CTTAATTAAA ATATATATTG GAATCACGGT TGCTTGAATC
  TATGGGTGTG GACGCTGTGG GCATGAAGGG TTAGCTGTGT                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	MOLF/EiJ	PWD/PhJ
ss61367287	NES16750868	PERLEGEN	MM_PANEL2	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	MOLF/EiJ	PWD/PhJ
rs45667166					SNP	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61367287	NES16750868	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:31898083 () rs orientation: forward

Symbol	Name	Function Class
Gm47465	predicted gene, 47465	within coordinates
Rr383168	regulatory region 383168	1976 bp upstream