rs45667610 SNP Detail

Summary

• ID
  rs45667610
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:67551936 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAGT CATTAAATGG CAGGGATACG
  A
  AGAAACCACA CACCTGCAGA TTCCT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148601363	ENSMUSSNP1105223	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs45667610					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:67551936 () rs orientation: forward

Symbol	Name	Function Class
Bend4	BEN domain containing 4	within coordinates
D5Ncnp4	DNA segment, Chr 5, National Center of Neurology and Psychiatry 4	615 bp distal
Rr612661	regulatory region 612661	109 bp distal
Rr612662	regulatory region 612662	216 bp proximal
Tssr46579	transcription start site region 46579	1113 bp upstream
Tssr51234	transcription start site region 51234	234 bp upstream