rs45672176 SNP Detail

Summary

• ID
  rs45672176
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75556020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCGTGGCT CGGTTTCAGC
  CTCAATGCCA TCCTGGCTTT TTTAGAGTGT CTAGGAGTAG CTCTGTTCCG CATCCCCATT
  TAAGCCAGCA GGGCACTGTC AGAAACTGAT TCTGGTTTCT CATTAAAGAG AGGCATGCTC
  AACCTTTCTG GAGAGGTTTG ACAGGGTGGC TTCCACCAAG AGAGGCAGGG ACAAGCTGGG
  W
  AGCAGTGATG GGGCCTGAGG GCAAGCCCGT GAGAAGTTGC AGTCTCAGGT GGGAAAGGTA
  AATCAAGTGT GCACATGGAA ATCCACCCTC AGTCACTGGA CTCTGAGGAA TGACTATGCC
  ACACGGAAGG GGCTGCCTTG TGACCTCAGC ATGTGCACTG GGTGCTGCCA ACTCTGCCAC
  ATACCACAAC GTCACTGTGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144696886	ENSMUSSNP437545	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45672176					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75556020 () rs orientation: forward

Symbol	Name	Function Class
Gm69448	predicted gene, 69448	629 bp upstream