rs45675032 SNP Detail

Summary

• ID
  rs45675032
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100824729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTCCCAGC ACCTACTGGG
  TGGCTTACAA GCACTTGTAA CTCCAGCTCC ATAGGATCTG ATGCCCCTGC CCTTGTAGGG
  CATCTGTACT CGTGTGCACA TACCCACATA ATTTTTAAAA AAAAAAAAAT TTTTTTTTAA
  GTGAAGGGGC ATTGTAATGG CAGAAGGCAG CATCAGGGGA GAAGCAGTTG GTAGTTGGTT
  R
  TGCACACTTT TAATCCCAGC AGTGAGGCAG GCAGATACCT GTGAGGTCAA GGTCAGCCTA
  CATATCAAGT TGCAGGCCAG CCAGGGCTAC ATAGTAAAAG AAAGAGGAAG AAAATTGAGA
  TGCATAGTGT TCTAGTTTGG CTTTCTGTTG CTTTGATAAA ACACTAATAA AAGCCAACAC
  AGGGGGCTGG AGAGATGGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135542923	ENSMUSSNP6464462	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
ss320850254	CHEV_3_100721336	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs45675032					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100824729 () rs orientation: forward

Symbol	Name	Function Class
Rr581925	regulatory region 581925	196 bp distal
Rr581926	regulatory region 581926	455 bp distal