rs45676289 SNP Detail

Summary

• ID
  rs45676289
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:114229421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGTTGAGA GGTCTTAGTC
  CGTTATCACC CTGGCAGGGA GCATGGTGGC ATGGTGCTGG AGGTAGTAAC TGAGAATTCT
  CTATCCAGAA CTGCAAGAAG AGAGAGACTG TGGGCTTGGA ATGGGGTCTT GGAAACCTCA
  AAGCCCACCC TCGTAACACA CTTCCCCCCA AAAGGTCACA ACCCTAATCC TTTAAAAGTT
  G
  AAATCCTCCC CACCCCACTC CCCCACCCCC ACCCCAGATG ATTAAATCAA GTCTATGAGC
  TTACTGGGGC TATCTTCATT CAAACCACCA CAGCCTGCTT CTTGTCCAGT TATTTTTCCA
  GGTGACCCAA CAGTGGTACA AACAGTCTAT ATGTGGTAGA GGGAACGTCT AGATCTTACT
  TTGGACGTTT TCAGATCATT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MSM/Ms
ss145296668	ENSMUSSNP4461118	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	MSM/Ms
rs45676289					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:114229421 () rs orientation: forward

Symbol	Name	Function Class
Arl15	ADP-ribosylation factor-like 15	within coordinates
Rr278345	regulatory region 278345	1294 bp proximal
Rr282444	regulatory region 282444	1221 bp distal