rs45682118 SNP Detail

Summary

• ID
  rs45682118
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:5536528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTATGTAC AGGAATCTAT
  CCCTAGAGTT TCCATTTGGT TTTCTATATG AGCTGGTACA GAACGCTAGT TACAACACTG
  GCTTTACTGT CTTCTCTTAG GTTGGGAAAA GCACAGGGAT TCTTCTTTTT CATTTTTCTG
  TAAAGGAAAG AGGACAAATA GCTACAAAGT ATCCTATGCA GATCACAGTG GATATGCAAG
  W
  CATTCTTAGT AATAACTGAT ATCCTCACGA CTATGAGCCT ATCTACTCCT AAGCAAGGTA
  TAGCTTCCTG TGTTTAAGTC TTTCAGATAC TTTATGATTT TCCTCATAGG CCATCTTGTG
  ATGCCTTATT TAGTGACTGA CATCATATTT TCCTTCCTAT TTCATGATCC TCTGCCCAGT
  TTTCTATTCA ATCACATTTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss145954774	ENSMUSSNP992934	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs45682118					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:5536528 () rs orientation: forward

Symbol	Name	Function Class
Tssr36375	transcription start site region 36375	293 bp upstream