rs45684816 SNP Detail

Summary

• ID
  rs45684816
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:169118307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGTA TATGAGTACA CTGTGGCTGT
  C
  TTCAGACACA CCAGAAGAGG GCATC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148281497	ENSMUSSNP4354019	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs45684816					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169118307 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr117	DNA Segment, Chr 2, Derry C. Roopenian 117	347 bp distal
D2Mit343	DNA segment, Chr 2, Massachusetts Institute of Technology 343	383 bp distal