rs45692066 SNP Detail

Summary

• ID
  rs45692066
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4488553 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGTAAGAG AAGTTTCTCT
  TTTCTGATCT CCTTCAAATT CATGGCAAGA AAAATCCCAA GAACTGTAGT TTCTATTAAA
  TTGAGAAGAC AGATGTGTCA TAGGGAAAGA ATTCTCTTCA ACAATAGCAG CAATGCCACA
  TAGCTAAGCA GCTGGAACCC TGCCTGACCA TAGCTCCACA GCCCTCCCCT TCCAAAAAGA
  R
  GCCAACGTGG CTCAAGAGGC TCCTCCCCAG GGGAAGCTGT TGCTCAGCCT CCATCCTAGG
  ACCAATTCTT TCATGCATAG CAAAACTTTC ATGAAATCAT GCCCTCCTCT CCCTCCTACT
  TCCCACTCCT CATTTTCATG GATCCCCCAA TTTTTCTCTG TGAATCTCCT CCCACACACA
  CACCCTTTTT CTCCTGGGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss132932010	ENSMUSSNP6529342	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs45692066					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4488553 () rs orientation: forward

Symbol	Name	Function Class
Gm53308	predicted gene, 53308	1984 bp downstream
Rr1253	regulatory region 1253	444 bp proximal
Rr626020	regulatory region 626020	within coordinates