rs45694441 SNP Detail

Summary

• ID
  rs45694441
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:79211574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAACTGGAC AGGCAGAACC
  TTATCACAGC AACTAGTTCT GTTGTCTCTC TTCCCTGCCC CAATTGTGCT GCCCTTGAGT
  AAGTATTTCC CCCTGGACAG ACAACCATCC TCCAACCCTG TGGGAACGCC TCACCCCTCA
  CAGGCCACCT AGCAGCGCAT TCTGCAGCCC AGCATGAATC CTGGTCTGGT CATCAAGAAA
  M
  TATCTGTGTT GGGCCTTTGT GCACTTTTCT TTCAATATGG GATATGCTGG TGGTAAAGGA
  GAGCGCCGTG GACAACTCTC TCTTCCAGAG GTGTTATAAG GATAAATGAA ATGATCTTCA
  TATAGCACTT TAGGATGTTC ATATGAAATG CACCTTTGTA AATATGAAGT ATTCTAAAAG
  GCCAGCACCT GCAAGTTCTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
ss52474196	NES15653488	PERLEGEN	MM_PANEL2	f	SNP	C		A	A	A
ss322720225	CHEV_8_81008844	CHEVERUD	SCREENING_POP	f	SNP		C				A
SNP Consensus Information
SNP					Consensus Type	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
rs45694441					SNP	C	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52474196	NES15653488	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:79211574 () rs orientation: forward

Symbol	Name	Function Class
Gm2225	predicted gene 2225	1089 bp downstream
Rr186904	regulatory region 186904	1027 bp proximal