rs45701207 SNP Detail

Summary

• ID
  rs45701207
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39766662 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTGGGAG AATGTCTGGT
  CAAGTCCACC ATGATTTTGC AAGCAAGCTG TTCGTTCCTG TTAGGTTGCT TTCCAATTAC
  AGGACCTTCA CAGACTTCTG AAAGATGTCC CTCATATACC TGGCTTGAAT ATATTTCTTT
  AAAAATAAAG ATTATATGAT GAAGTGAACT GTGAATTTCC TAAAATTCAA TGCTAGCATA
  R
  TAACATATAC TCTTTTTATA TATGCACACA TATATATGTT AATAATGTAT GCCACTAAAA
  CATCAGGATG ATGATGATGA TTTTGCTAGT GGAATGTATC TTCTCTACTG GAAGGAGAGT
  AGTGGTAAAA GCCAGCAGGA GCACCACCAA CAATACAGTG AACAATGGCA GAAGCTTTCA
  CTACTTTCCC TACCTGTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134853009	ENSMUSSNP4489900	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45701207					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39766662 () rs orientation: forward

Symbol	Name	Function Class
Gm46834	predicted gene, 46834	717 bp upstream
Rr575767	regulatory region 575767	227 bp proximal
Rr575768	regulatory region 575768	728 bp proximal
Rr575769	regulatory region 575769	1603 bp proximal