rs45715068 SNP Detail

Summary

• ID
  rs45715068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86587949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CTGGCAGGCA CTTAACTGTG TAATCCTTAC TTCCTCCACC
  CCCTCACATT CCTCGGCATT CCATAAACAC TCTGGCTCCC GCAGGTGGCC CTGGCCAGGA
  R
  GGTGGCACCT TTATTTAAAG GCCCTGCTAT TCTAAGTCCC ACTCACCCAC TCACCCTCAG
  TCTGAAAACT CCACTTGCTC CCTCCCACTT TCCTGTTTCC A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss133357962	ENSMUSSNP4892153	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs45715068					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86587949 () rs orientation: forward

Symbol	Name	Function Class
Gm67317	predicted gene, 67317	1610 bp upstream
Tssr57494	transcription start site region 57494	1394 bp downstream
Tssr57495	transcription start site region 57495	1650 bp upstream
Tssr61824	transcription start site region 61824	1641 bp upstream
Tssr61825	transcription start site region 61825	1605 bp upstream