rs45715079 SNP Detail

Summary

• ID
  rs45715079
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152612520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGTTTTTT TTTTGTTTGT
  TTGTTTGTGT TTTTCGAGAC AGGGTTTTTC TGAGTAGACC TGGCTGTCCT AGAACTCTCT
  CTGTACTCCA GGCTGGCCTC AAACTCAGAA ATCCACCTGC CTCTGCCTCC CAAGTGCTGG
  GATTAAATTG TTTTTTTGGT TGTTTTTTTA AATTTATTTT TATGTACATT GGTGTTTTGA
  M
  TGCATGAATT TCTATGTGAG GTTATTGGAT CCTCTGGATC AGGAGTTACA GATGACTGCG
  AGCTGCCATG TGGGTACTGG GAATTGAACC TGGGTCCTCT GGAAGAGCAG CCAGTGCTCT
  TAACTGCTGA GCTATCTCTC CAGCCCTTCA TCTCTCCGGC CCCCTTTTGG GTTTTCAAGA
  CAGGGTTTCT CTGTGTGTAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147974234	ENSMUSSNP1817677	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45715079					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152612520 () rs orientation: forward

Symbol	Name	Function Class
Rr374091	regulatory region 374091	1138 bp upstream
Rr567463	regulatory region 567463	385 bp distal