rs45715582 SNP Detail

Summary

• ID
  rs45715582
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24005235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAG GGGGCGGAGC CAGTAGGAAT
  G
  GGGCTACCTG GGTTTAGGAT CCCCG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss145332678	ENSMUSSNP1977498	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss325327338	CHEV_17_23923228	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs45715582					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24005235 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8693	CpG island 8693	within coordinates
Flywch2	FLYWCH family member 2	180 bp upstream
Tssr146663	transcription start site region 146663	178 bp upstream
Tssr146664	transcription start site region 146664	139 bp upstream
Tssr146665	transcription start site region 146665	24 bp upstream