TTTGTCCAAA CTCTGACCCT GTGGGAAGCT GAGTTTAAAG GACTGAAAGA GGCAATGTCC GGGTAGCACA TTGTTCAGAT TATCTCACAC AGGTATTAAT R GATATTTGTA GTTAAGATTT ATGCTAAGAA TCAAAAGCAA AGCCACTACA AAAATATTTG GAAATCTTAT AGTTTGTTCA GAAAAGGGAC ATGTTTAAA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss147514243 | ENSMUSSNP4146256 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | ||
ss320498558 | CHEV_2_126756504 | CHEVERUD | SCREENING_POP | f | SNP | A | G | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs45716374 | SNP | G | G | A | G |
Location: Chr2:126772688 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi12210 | CpG island 12210 | 1999 bp proximal | ||||||
Gm75308 | predicted gene, 75308 | 1925 bp upstream | ||||||
Rr564422 | regulatory region 564422 | 1561 bp proximal | ||||||
Sppl2a | signal peptide peptidase like 2A | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Tssr19974 | transcription start site region 19974 | 1738 bp downstream | ||||||
Tssr26084 | transcription start site region 26084 | 1133 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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