rs45720657 SNP Detail

Summary

• ID
  rs45720657
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52029255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGAACTTG GTCTTGGGGA
  GTCCTGAGCC CATACTTTTC CATATCTGTT GAATGTGTCA AATCTCCTAT AGCTATATGT
  TAAGTCCACT TGATTTGCAC TATAGTTTAG CGGAAGTTTC TTTGTTTTTG GGTATTTAGA
  TGAGAATAGG GTATTGAAAC CACCTTTTGT CGTATTAGGA CCTGAGTTTT TATTAGTGTT
  G
  ACATACATTG AGAGCCCCAA CAGTGTATGT GTACTTATAA TTGTTACATG AATTCCTTTT
  TTATTAATGC AAACAAGCTT CTTTATTTCT CCTTAGTAAC TCTGGCCTGG CCTGTACTTT
  ATCAGGTCTC AGAGTAGCCA TGTTGGCTTG TTTTCAGTGT TTCTTCACTT GATAGATTGT
  TTTCATCCTT CCACCTCCAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss137728934	ENSMUSSNP5154541	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs45720657					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52029255 () rs orientation: forward

Symbol	Name	Function Class
Gm60186	predicted gene, 60186	1038 bp downstream
Rr387211	regulatory region 387211	821 bp upstream