rs45721612 SNP Detail

Summary

• ID
  rs45721612
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:21088510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATAGCAATT TTTTTCAACC
  TTTTTTTTTT GAGAGGAAAA ATATAAAGAT TGAAGATTGA ATTGAAAAGC CTAGGGAGGG
  CTTTACTTTG TGGCCAAATA GTCACAAGGA TTGTGATGGC TTTTTCAAGT AACATTTATA
  TCCCCTCAAG TCCTCTCTTT GCTCTTAAGG GATCTGAAAT GGAGTTTCCC ATTTTTAATG
  Y
  AGGAAAAGTC TGTCTATGTA ATTAAAATTG TGTTTTGGGA TGGCTTACTG TGACTCACTG
  CCTCAGAGGA TCCTACATCG TTCCTTGCTC TGAGCTCAAA ACTCCTACTG CTTTGGAGTG
  TCCTGAATTT CTTTGGGCAT TCAGCCAAAC TTAGAGAACT GACCAGGCTG GATTTGAATT
  CACAGAAGTA TGTTTGCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146826255	ENSMUSSNP5271471	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs45721612					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:21088510 () rs orientation: forward

Symbol	Name	Function Class
Rnf125	ring finger protein 125	within coordinates
Rr370347	regulatory region 370347	1701 bp upstream